moduleNumber {moduleColor} | R Documentation |
Fixed-height cut of a dendrogram.
Description
Detects branches of on the input dendrogram by performing a fixed-height cut.
Usage
moduleNumber(dendro, cutHeight = 0.9, minSize = 50)
Arguments
dendro |
a hierarchical clustering dendorgram such as one returned by |
cutHeight |
Maximum joining heights that will be considered. |
minSize |
Minimum cluster size. |
Details
All contiguous branches below the height cutHeight
that contain at least minSize
objects
are assigned unique positive numerical labels; all unassigned objects are assigned label 0.
Value
A vector of numerical labels giving the assigment of each object.
Note
The numerical labels may not be sequential. See normalizeLabels
for a way to put the
labels into a standard order.
Author(s)
Peter Langfelder, Peter.Langfelder@gmail.com
See Also
hclust
, cutree
, normalizeLabels
[Package moduleColor version 1.8-4 Index]