Trates {mispitools}

Threshold rates: a function for computing error rates and Matthews correlation coefficient of a specific LR threshold.

Description

Threshold rates: a function for computing error rates and Matthews correlation coefficient of a specific LR threshold.

Usage

Trates(datasim, threshold)

Arguments

datasim

Input dataframe containing expected LRs for related and unrelated POIs. It should be the output from makeLRsims function.

threshold

Likelihood ratio threshold selected for error rates calculation.

Value

Values of false positive and false negative rates and MCC for a specific LR threshold.

Examples

library(forrel)
x = linearPed(2)
x = setMarkers(x, locusAttributes = NorwegianFrequencies[1:5])
x = profileSim(x, N = 1, ids = 2)
datasim = simLRgen(x, missing = 5, 10, 123)
Trates(datasim, 10)