filterMarker {mineCitrus}

Filters list of data matrices with columns corresponding to the measured parameters of interest

Description

Filters list of data matrices with columns corresponding to the measured parameters of interest

Usage

filterMarker(clustdat, markers)

Arguments

clustdat

a list of data matrices with list elements corresponding to clusters and matrices of intensities of measured parameters

markers

Indices of the columns of parmeters to keep

Value

A list of data matrices with columns of data matrices only corresponding to measured parameters of interest

Examples

library(mineCitrus)
data("citrus.combinedFCSSet")
data("citrus.foldClustering")
data("citrus.foldFeatureSet")
meds<-allmeds(citrus.combinedFCSSet=citrus.combinedFCSSet,
              citrus.foldClustering=citrus.foldClustering,
              citrus.foldFeatureSet=citrus.foldFeatureSet)
meds2<-filterMarker(clustdat=meds,markers=c(2,3))