citrus.foldFeatureSet {mineCitrus}

Correlation data for example of Citrus data set from nolanlab/citrus

Description

A dataset containing the association of red and blue in clusters with different sample groups

Usage

citrus.foldFeatureSet

Format

A list with 8 elements:

allFeatures

Data set for each sample for all markers and clusters

allLargeEnoughClusters

Vector of clusters meeting size threshold

foldFeatures

Data for each fold clustering

foldLargeEnoughClusters

Clusters meeting size threshold for each fold clustering

folds

Descriptions of each data clustering

leftoutFeatures

Data omitted from analyses

minimumClusterSizePercent

Minimum size threshold to retain clusters in analysis

nFolds

The number of times data is clustered

...

Source

https://github.com/nolanlab/citrus