psmelt {microbial}

Melt phyloseq data object into large data.frame

Description

Melt phyloseq data object into large data.frame

Usage

psmelt(physeq, ...)

Arguments

physeq

A sample_data-class, or a phyloseq-class object with a sample_data. If the sample_data slot is missing in physeq, then physeq will be returned as-is, and a warning will be printed to screen.

...

parameters for the subset_samples function in phyloseq package