phy_tree {microbial}

Retrieve phylogenetic tree (phylo-class) from object.

Description

Retrieve phylogenetic tree (phylo-class) from object.

Usage

phy_tree(physeq, ...)

Arguments

physeq

(Required). An instance of phyloseq-class that contains a phylogenetic tree. If physeq is a phylogenetic tree (a component data class), then it is returned as-is.

...

parameters for the phy_tree function in phyloseq package