plot_mir_new {miRetrieve} | R Documentation |
Plot number of newly mentioned miRNA names/year
Description
Plot number of newly mentioned miRNA names/year.
Usage
plot_mir_new(
df,
threshold = 1,
start = NULL,
end = NULL,
colour = "steelblue3",
col.mir = miRNA,
col.year = Year,
title = NULL
)
Arguments
df |
Data frame containing miRNA names and publication years. |
threshold |
Integer. Specifies how often a miRNA must be mentioned in a year to be considered "mentioned". |
start |
Integer. Optional. Beginning of publication period.
If |
end |
Integer. Optional. End of publication period.
If |
colour |
String. Colour of bar plot. |
col.mir |
Symbol. Column containing miRNA names. |
col.year |
Symbol. Column containing publication year. |
title |
String. Plot title. |
Details
Plot how many miRNAs are mentioned for the first time in different year.
If a miRNA is considered to be "mentioned" in a year can be regulated
via the threshold
argument. If, for example, threshold
is set to 3, but a
miRNA is mentioned only twice in a year, it is not considered
to be "mentioned" for this year.
Value
Bar plot displaying the number of newly mentioned miRNA names/year.
See Also
Other miR development functions:
plot_mir_development()