experimentToTable {memoria} | R Documentation |
Turns the outcome of runExperiment
into a long table.
Description
Takes the output of runExperiment
, extracts the dataframes containing the ecological memory patterns generated by computeMemory
, and binds them together into a single dataframe ready for further analyses or plotting.
Usage
experimentToTable(
experiment.output = NULL,
parameters.file = NULL,
sampling.names = NULL,
R2 = TRUE
)
Arguments
experiment.output |
list, output of |
parameters.file |
dataframe of simulation parameters. |
sampling.names |
vector of character strings with the names of the columns of |
R2 |
boolean. If TRUE, the average pseudo R-squared of the random forest models used to analyze the ecological memory pattern of the virtual taxa are shown with the taxon traits. |
Details
This function is used internally by plotExperiment
, but it is also available to users in case they want to do other kinds of analyses or plots with the data.
Value
A dataframe.
Author(s)
Blas M. Benito <blasbenito@gmail.com>
See Also
[Package memoria version 1.0.0 Index]