Quantifying Ecological Memory in Palaeoecological Datasets and Other Long Time-Series


[Up] [Top]

Documentation for package ‘memoria’ version 1.0.0

Help Pages

climate Dataframe with palaeoclimatic data.
computeMemory Quantifies ecological memory with Random Forest.
experimentToTable Turns the outcome of 'runExperiment' into a long table.
extractMemoryFeatures Extracts ecological memory features on the output of 'computeMemory'.
mergePalaeoData Merges palaeoecological datasets with different time resolution.
palaeodata Dataframe with pollen and climate data.
palaeodataLagged Lagged data generated by 'prepareLaggedData'.
palaeodataMemory Output of 'computeMemory'
plotExperiment Plots the output of 'runExperiment'.
plotInteraction Plots response surfaces for tree-based models.
plotMemory Plots output of 'computeMemory'
pollen Dataframe with pollen counts.
prepareLaggedData Organizes time series data into lags.
runExperiment Computes ecological memory patterns on simulated pollen curves produced by the 'virtualPollen' library.