get_haplotypes_individuals {malan} | R Documentation |
Get haplotype matrix from list of individuals
Description
Requires that haplotypes are first populated, e.g.
with pedigrees_all_populate_haplotypes()
,
pedigrees_all_populate_haplotypes_custom_founders()
, or
pedigrees_all_populate_haplotypes_ladder_bounded()
.
Usage
get_haplotypes_individuals(individuals)
Arguments
individuals |
Individuals to get haplotypes for. |
Value
Matrix of haplotypes where row i
is the haplotype of individuals[[i]]
.
See Also
Examples
sim <- sample_geneology(100, 10)
peds <- build_pedigrees(sim$population)
pedigrees_all_populate_haplotypes(peds, 2, c(1, 1))
get_haplotypes_individuals(sim$end_generation_individuals)
[Package malan version 1.0.3 Index]