Lassoed Principal Components for Testing Significance of Features


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Documentation for package ‘lpc’ version 1.0.2.1

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lpc-package This package implements the Lassoed Principal Components (LPC) method. It is used to compute LPC scores for each gene in a microrray experiment with a survival, quantitative, or two-class outcome.
EstimateLPCFDR Estimate LPC False Discovery Rates.
EstimateTFDR Estimate T False Discovery Rates.
LPC Compute LPC score for each gene
lpc This package implements the Lassoed Principal Components (LPC) method. It is used to compute LPC scores for each gene in a microrray experiment with a survival, quantitative, or two-class outcome.
PlotFDRs Plot FDRs for both T and LPC
PredictiveAdvantage Plot predictive advantage of LPC vs. T
PrintGeneList Print the list of genes with highest LPC scores