NormLFC {lfc}

Standard LFC effect size estimator

Description

Computes the standard, normalized log2 fold change with given pseudocounts

Usage

NormLFC(A, B, pseudo = c(1, 1), normalizeFun = CenterMedian)

Arguments

A

Vector of counts from condition A

B

Vector of counts from condition B

pseudo

Vector of length 2 of the pseudo counts

normalizeFun

Function to normalize the obtained effect sizes

Value

The vector containing the estimates

Examples

  NormLFC(rnorm(1000,200),rnorm(1000,100))