bigdata |
Snippet of example data to demonstrate the functionality of 'kronos' between and among three different groups |
bigmeta |
Descriptional metadata for the 'bigdata' object, for the purpose of demonstration. |
build_kronos_formula |
Update 'kronos' formula in light of sine and cosine components |
delistKronos_groupwise |
Get Results from list of KronosOut Objects |
delistKronos_pairwise |
Get Results from list of 'KronosOut' Objects |
fit_cosinor_model |
Fit cosinor model |
fit_groupwise_model |
Fit cosinor model |
fw_kronos |
Fit a cosinor model and extract relevant parameters on a feature table. |
getKronos |
Get Results from 'KronosOut' Object |
getKronos_fit |
Get Results from 'KronosOut' Object |
getKronos_groupwise |
Get Results from 'KronosOut' Object |
getKronos_input |
Get Results from 'KronosOut' Object |
getKronos_pairwise |
Get Results from 'KronosOut' Object |
getKronos_pairwise_p |
Get Results from 'KronosOut' Object |
getKronos_params |
Get Results from 'KronosOut' Object |
getKronos_trace |
Get Results from 'KronosOut' Object |
get_cos_sine |
Get sine and cosine components |
get_vars |
Figure out what variable represents time. Called by main 'kronos' function. |
gg_kronos_acrogram |
A plotting method for acrophase circleplots using 'ggplot2'. |
gg_kronos_circle |
A plotting method for circadian plots using 'ggplot2'. |
gg_kronos_sinusoid |
A plotting method for circadian plots using 'ggplot2'. |
groupdata |
Snippet of example data to demonstrate the functionality of 'kronos' between and among three different groups |
kronos |
Fit a cosinor model and extract relevant parameters |
kronosListToTable |
Wrangle results from list of 'KronosOut' Objects to publication ready table. |
kronosOut-class |
An S4 class to contain all output parameters and plotting information from the 'kronos' main pipeline |
kronos_anova |
Extract p-value from full fit |
kronos_predict |
Give tracing information for plotting purposes |
onevariable |
Snippet of example data to demonstrate the functionality of 'kronos' in the most simple scenario. |
pairwise_cosinor_model |
Fit pairwise cosinor models as some sort of TukeyHSD. |
show-method |
Show method for 'kronosOut' object. |
twowaydata |
Snippet of example data to demonstrate the functionality of 'kronos' in the two-factor design scenario. |