hsa04020 {kangar00}

Example pathway object for pathway hsa04020.

Description

An object of class pathway for the pathway with KEGG identifier hsa04020.

Usage

data(hsa04020)

Format

A pathway object including 180 genes.

id

KEGG identifier of the example pathways

adj

gives the quadratic adjacency matrix for the pathway and with that the network topology. Matrix dimensions equal the number of genes in the pathway

sign

includes a vector of signs to distinguish activations and inhibitions in the adjacency matrix

Source

simulated data and Ensembl extract