calculate.gene.rank {inferCSN}

Calculate and rank TFs in network

Description

Calculate and rank TFs in network

Usage

calculate.gene.rank(
  network_table,
  regulators = NULL,
  targets = NULL,
  directed = FALSE
)

Arguments

network_table

The weight data table of network.

regulators

Regulators list.

targets

Targets list.

directed

If network is directed or not.

Value

A data.table with three columns

Examples

data("example_matrix")
network_table <- inferCSN(example_matrix)
head(calculate.gene.rank(network_table))
head(calculate.gene.rank(network_table, regulators = "g1"))