pp_exp {imsig}

Pre-processing expression matrix

Description

Subsets the user's dataset based on the genes that are common to the users dataset and ImSig.

Usage

pp_exp(exp)

Arguments

exp

Dataframe of transcriptomic data (natural scale) containing genes as rows and samples as columns. Note: Gene names should be set as row names and duplicates are not allowed. Missing values are not allowed within the expression matrix. Check example- head(example_data): example_data.

Value

Expression dataframe