unreliable_regions {iimi}

The unreliable regions of the virus segments

Description

A data frame of unmappable regions and regions of CG% and A% over 60% and 45% respectively for the virus segments. It is worth to note that if a virus segment does not have any unreliable regions, that virus segment is not shown in this data frame.

Usage

unreliable_regions

Format

A data frame of unreliable regions in the run-length encoding format for virus segments.

Start

The start position of the region that is considered unreliable

End

The end position of the region that is considered unreliable

Virus segment

The virus segment ID

Categories

The category that this unrelible region belong to, which are Unmappable regions (host), Unmappable regions (virus), CG% > 60%, A% > 45%.