plot_cov {iimi}

plot_cov()

Description

Plots the coverage profile of the mapped plant sample.

Usage

plot_cov(
  covs,
  legend_status = TRUE,
  nucleotide_status = TRUE,
  window = 75,
  ...
)

Arguments

covs

An RLE list of coverage information of one or more plant samples.

legend_status

Whether display legend. Default is TRUE.

nucleotide_status

Whether display a sliding window of A percentage and CG content. Default is TRUE.

window

The sliding window size. Default is 75.

...

Other arguments that can be passed to plot, lines, or legend.

Value

The coverage profile of the mapped plant sample.

Examples

plot_cov(example_cov$S1)