create_high_nucleotide_content {iimi}

create_high_nucleotide_content

Description

Creates a data frame of the start and end positions of the regions_a that are considered high in A% and GC%.

Usage

create_high_nucleotide_content(gc = 0.6, a = 0.45, window = 75)

Arguments

gc

The threshold for GC content. It is the proportion of G and C nucleotides in a sliding window. Default is 0.6.

a

The threshold for A nucleotide. It is the proportion of A nucleotide in a sliding window. Default is 0.45.

window

The sliding window size of your choice. Default is 75.

Value

A data frame of the start and end positions of the regions_a that are considered high in A% and GC%.

Examples

## Not run: high_nucleotides_regions <- create_high_nucleotide_content()