sim.gRoeMetz.config {iMRMC} | R Documentation |
Create a configuration object for the sim.gRoeMetz program
Description
This function creates a configuration object for the Roe & Metz simulation model to be used as input for the sim.gRoeMetz program. The default model returned when there are no arguments given to the function is the "HH" model from Roe1987_Acad-Radiol_v4p298. Following that paper, The user can specify three parameters related to experiment size (nR, nC.neg, nC.pos) and five parameters parameters specifying a linear model that does not depend on modality or truth (mu.neg, mu.pos, var_r, var_c, var_rc). The mu.pos is set to 1.0, which yields a reader averaged AUC of approximately 0.765.
Usage
sim.gRoeMetz.config(
nR = 5,
nC.neg = 40,
nC.pos = 40,
mu.neg = 0,
mu.pos = 1,
var_r = 0.03,
var_c = 0.3,
var_rc = 0.2
)
Arguments
nR |
Number of readers (default = 5) |
nC.neg |
Number of signal-absent cases (default = 25) |
nC.pos |
Number of signal-present cases (default = 25) |
mu.neg |
Mean fixed effect of signal-absent distribution (default = 0.0) |
mu.pos |
Mean fixed effect of signal-present distribution (default = 1.0) |
var_r |
Variance of reader random effect (default = 0.03) |
var_c |
Variance of case random effect (default = 0.30) |
var_rc |
Variance of reader.by.case random effect (default = 0.20) |
Details
If no arguments, this function returns a default simulation configuration for sim.gRoeMetz
Value
config [list] Refer to the sim.gRoeMetz input variable