hto.anno {iCellR}

Demultiplexing HTOs

Description

Demultiplexing HTOs

Usage

hto.anno(hto.data = "data.frame", cov.thr = 10, assignment.thr = 80)

Arguments

hto.data

HTO raw data

cov.thr

A number which average coverage is divided by to set a threshold for low coverage. For example 10 means it is 10 time less than the average. default = 10.

assignment.thr

A percent above which you decide to set as a good sample assignment/HTO, default = 80.

Value

An object of class iCellR