find_neighbors {iCellR}

K Nearest Neighbour Search

Description

Uses a kd-tree to find the p number of near neighbours for each point in an input/output dataset.

Usage

find_neighbors(data, k)

Arguments

data

matrix; input data matrix

k

integer; number of nearest neighbours

Details

Use the nn2 function from the RANN package, utilizes the Approximate Near Neighbor (ANN) C++ library, which can give the exact near neighbours or (as the name suggests) approximate near neighbours to within a specified error bound. For more information on the ANN library please visit http://www.cs.umd.edu/~mount/ANN/.