find.dim.genes {iCellR}

Find model genes from PCA data

Description

This function takes an object of class iCellR finds the model genes to run a second round of PCA.

Usage

find.dim.genes(x = NULL, dims = 1:10, top.pos = 15, top.neg = 5)

Arguments

x

An object of class iCellR.

dims

PC dimentions to be used.

top.pos

Number of top positive marker genes to be taken from each PC, default = 15.

top.neg

Number of top negative marker genes to be taken from each PC, default = 5.

Value

An object of class iCellR.