clust.cond.info {iCellR}

Calculate cluster and conditions frequencies

Description

This function takes an object of class iCellR and calculates cluster and conditions frequencies.

Usage

clust.cond.info(
  x = NULL,
  plot.type = "pie",
  my.out.put = "data",
  normalize.ncell = TRUE,
  normalize.by = "percentage"
)

Arguments

x

An object of class iCellR.

plot.type

Choose from pie/pie.cond or bar/bar.cond, defult = pie.

my.out.put

Chose from "data" or "plot", default = "data".

normalize.ncell

If TRUE the values will be normalized to the number of cells by downsampling.

normalize.by

Chose from "sf" (size factor) or "percentage", default = "percentage".

Value

An object of class iCellR.