History Matching and Emulation Package
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Documentation for package ‘hmer’ version 1.5.6
Help Pages
| analyze_diagnostic | Diagnostic Analysis for Emulators |
| behaviour_plot | Output Plotting |
| bimodal_emulator_from_data | Bimodal Emulation |
| BirthDeath | Birth-Death Model Results |
| classification_diag | Classification Diagnostics |
| collect_emulators | Collect and order emulators |
| comparison_diag | Comparison Diagnostics |
| Correlator | Correlation Structure |
| diagnostic_pass | Automated Diagnostics and Modifications |
| diagnostic_wrap | Diagnostic plots for wave outputs |
| directional_deriv | Derivative inner product |
| directional_proposal | Emulated Derivative Point Proposal |
| effect_strength | Find Effect Strength of Active Variables |
| Emulator | Bayes Linear Emulator |
| emulator_from_data | Generate Emulators from Data |
| emulator_plot | Plot Emulator Outputs |
| exp_sq | Exponential squared correlation function |
| full_wave | Automatic Wave Calculation |
| gamma_exp | Gamma-exponential correlation function |
| generate_new_design | Generate Proposal Points |
| generate_new_runs | Generate Proposal Points |
| get_diagnostic | Diagnostic Tests for Emulators |
| HierarchicalEmulator | Hierarchical Bayes Linear Emulator |
| hit_by_wave | Output Hit Summary |
| idemc | IDEMC Point Generation |
| individual_errors | Predictive Error Plots |
| matern | Matern correlation function |
| nth_implausible | nth Maximum Implausibility |
| orn_uhl | Ornstein-Uhlenbeck correlation function |
| output_plot | Emulator Expectation Against Target Outputs |
| plot_actives | Active variable plotting |
| plot_lattice | Plot Lattice of Emulator Implausibilities |
| plot_wrap | Plot proposed points |
| problem_data | Data for an interesting emulation problem |
| Proto_emulator | Prototype Class for Emulator-like Objects |
| rat_quad | Rational Quadratic correlation function |
| residual_diag | Emulator Regression Residuals |
| simulator_plot | Plot simulator outputs for multiple waves |
| SIREmulators | Sample Emulators |
| SIRImplausibility | Sample Implausibility Data |
| SIRMultiWaveData | Sample Multi-wave Results |
| SIRMultiWaveEmulators | Sample Multi-wave Emulators |
| SIRSample | Sample SIR data |
| SIR_stochastic | Stochastic SIR Data |
| space_removal | Percentage of Space Removed |
| space_removed | Space Removal Diagnostics |
| standard_errors | Standardized Error Diagnostics |
| subset_emulators | Subsetting for Bimodal/Variance Emulators |
| summary_diag | Summary Statistics for Emulators |
| validation_diagnostics | Emulator Diagnostics |
| validation_pairs | Validation Set Diagnostics and Implausibility |
| variance_emulator_from_data | Variance Emulator Creation (Deprecated) |
| wave_dependencies | Multiple Wave Inputs vs Outputs |
| wave_points | Multiple Wave Point Plotting |
| wave_values | Multiple Wave Output Plotting |