alpha_div |
Alpha diversity |
bat.diet.hierarchy |
Bat diet hierarchy |
bat.diet.otutable |
Bat diet OTU table |
bat.diet.tree |
Bat diet OTU tree |
beta_dis |
Beta dissimilarity |
copy_filt |
OTU/ASV copy number filtering |
CqN |
Sørensen-type overlap |
depth_cov |
Depth coverage assessment |
depth_filt |
Sequencing depth filtering |
div_part |
Multi-level diversity partitioning |
div_profile |
Diversity profile |
div_profile_plot |
Diversity profile plot |
div_test |
Diversity test |
div_test_plot |
Diversity test plotting |
gamma_div |
Gamma diversity |
hill_div |
Hill numbers computation |
index_div |
Diversity index computation |
is.nested |
Check if hierachy is nested |
match_data |
Match data |
pair_dis |
Pairwise dissimilarity |
pair_dis_plot |
Pairwise dissimilarity plot |
SqN |
Jaccard-type turnover-complement |
to.incidence |
Hill numbers computation |
tree_depth |
Tree depth |
tss |
Total Sum Scaling normalisation |
UqN |
Jaccard-type overlap |
VqN |
Sørensen-type turnover-complement |