cnvall.mtx {hiddenf} | R Documentation |
Copy Number Variation
Description
Data from an experiment (courtesy of Dr. Matthew Breen, N.C. State University) to study copy number variation in dogs. Experiment included thousands of probes, several of which are included here, and indexed by the variable called ‘dataset’.
Usage
data(cnvall.mtx)
Value
cnvall.mtx |
Matrix of copy number measurements for several probes. Measured for two types of tissue (columns) on each of six dogs (rows) with lymphoma. Copy Number measurements are one column in the matrix and it is not formatted for functions in 'hiddenf' that require matrix input. |
Examples
data(cnvall.mtx)
cnvall.mtx
cnv3.mtx <- matrix(cnvall.mtx[25:36,3],byrow=TRUE,nrow=12,ncol=2)
cnv3.out <- HiddenF(cnv3.mtx)
print(cnv3.out$pvalue)
anova(cnv3.out)
[Package hiddenf version 2.0 Index]