leafArea {heritability} | R Documentation |
Arabidopsis leaf area data for the hapmap and Swedish regmap population.
Description
Arabidopsis leaf area data for the hapmap and Swedish regmap population.
Usage
data(LA_H); data(LA_S)
Format
Data frame with leaf area observations:
genotype
a factor, the levels being the accession identifiers
LA13_H
Leaf area 13 days after sowing, in numbers of pixels (hapmap)
LA13_S
Leaf area 13 days after sowing, in numbers of pixels (Swedish regmap)
replicate
The replicate (or block) each plant is contained in (factor with levels
1
to4
)rep1
numeric encoding of the factor replicate: equals 1 if the plant is in replicate 1 and 0 otherwise
rep2
numeric encoding of the factor replicate: equals 1 if the plant is in replicate 2 and 0 otherwise
rep3
numeric encoding of the factor replicate: equals 1 if the plant is in replicate 3 and 0 otherwise
x
The within image x-coordinate of the plant. A factor with levels
1
2
3
y
The within image y-coordinate of the plant. A factor with levels
1
2
3
4
x1
numeric encoding of the factor
x
: equals 1 if the plant is in position 1 and 0 otherwisex2
numeric encoding of the factor
x
: equals 1 if the plant is in position 2 and 0 otherwisey1
numeric encoding of the factor
y
: equals 1 if the plant is in position 1 and 0 otherwisey2
numeric encoding of the factor
y
: equals 1 if the plant is in position 2 and 0 otherwisey3
numeric encoding of the factor
y
: equals 1 if the plant is in position 3 and 0 otherwise
Author(s)
Willem Kruijer <willlem.kruijer@wur.nl>; experiments conducted by Padraic Flood <flood@mpipz.mpg.de>
References
Kruijer, W. et al. (2015) Marker-based estimation of heritability in immortal populations. Genetics, Vol. 199(2), p. 1-20.
See Also
For the corresponding genetic relatedness matrices, see K_hapmap
and K_swedish
.
Examples
data(LA_H); data(LA_S)