Inference of Trait Associations with SNP Haplotypes and Other
Attributes using the EM Algorithm
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Documentation for package ‘hapassoc’ version 1.2-9
Help Pages
| anova.hapassoc | Return likelihood ratio test of haplotype effect |
| hapassoc | EM algorithm to fit maximum likelihood estimates of trait associations with SNP haplotypes |
| hypoDat | Simulated data for a hypothetical binary trait |
| hypoDatGeno | Simulated data for a hypothetical genetic SNPs |
| logLik.hapassoc | Return log-likelihood |
| pre.hapassoc | Pre-process the data before fitting it with hapassoc |
| summary.hapassoc | Summarize results of the hapassoc function |