CreatePseudobulkTable {grandR}

Create Pseudobulk Table from a Seurat object

Description

Create Pseudobulk Table from a Seurat object

Usage

CreatePseudobulkTable(
  data,
  name.column = "Name",
  pseudobulk.column = "Condition"
)

Arguments

data

a Seurat object

name.column

name of the metadata column containing the sample/cell names. Default "Name".

pseudobulk.column

name of the metadata column containing the Pseudobulk names. Default "Condition".

Details

This function returns a table which can be used as input for GRAND3

Value

a table with two columns "Cell" and "Pseudobulk"