gpmap-package |
Tools for analysing and plotting genotype-phenotype maps |
A |
Dataset containing example GP maps |
AA |
Dataset containing example GP maps |
AD |
Dataset containing example GP maps |
D |
Dataset containing example GP maps |
DA |
Dataset containing example GP maps |
DD |
Dataset containing example GP maps |
decompose_monotone |
Decompose genotype-phenotype map(s) using monotone regression |
decompose_monotone_single |
Decompose genotype-phenotype map(s) using monotone regression |
degree_of_monotonicity |
Degree of monotonicity of GP map |
degree_of_monotonicity_single |
Degree of monotonicity of GP map |
enumerate_genotypes |
Function for enumerating genotypes for N biallelic loci |
generate_gpmap |
Function for creating genotype-phenotype (GP) maps |
gpmap |
Function for creating genotype-phenotype (GP) maps |
monotone_regression |
Perform monotone regression on a genotype-phenotype (GP) map |
mouseweight |
Dataset containing example GP maps |
partial_genotype_order |
Generate partial ordering of genotype space based from allele content of genotypes |
plot.gpmap |
Functions for creating lineplots of genotype-phenotype (GP) maps |
plot.gpmap.decomp.mono |
Functions for creating lineplots of genotype-phenotype (GP) maps |
print.gpmap |
Print function for 'gpmap' objects |