glmnetr.cis {glmnetr}R Documentation

A redirect to nested.cis()

Description

See nested.cis(), glmnetr.cis() is depricated

Usage

glmnetr.cis(object, type = "devrat", pow = 1, digits = 4, returnd = 0)

Arguments

object

A nested.glmnetr output object.

type

determines what type of nested cross validation performance measures are compared. Possible values are "devrat" to compare the deviance ratios, i.e. the fractional reduction in deviance relative to the null model deviance, "agree" to compare agreement, "lincal" to compare the linear calibration slope coefficients, "intcal" to compare the linear calibration intercept coefficients, from the nested cross validation.

pow

the power to which the average of correlations is to be raised. Only applies to the "gaussian" model. Default is 2 to yield R-square but can be on to show correlations. pow is ignored for the family of "cox" and "binomial". When pow = 2, calculations are made using correlations and the final estimates and confidence intervals are raised to the power of 2. A negative sign before an R-square estimate or confidence limit indicates the estimate or confidence limit was negative before being raised to the power of 2.

digits

digits for printing of z-scores, p-values, etc. with default of 4

returnd

1 to return the deviance ratios in a list, 0 to not return. The deviances are stored in the nested.glmnetr() output object but not the deviance ratios. This function provides a simple mechanism to obtain the cross validated deviance ratios.

Value

A printout to the R console


[Package glmnetr version 0.5-2 Index]