emale_prot_ava {gggenomes}

All-versus-all alignments 6 EMALE proteomes

Description

One row per alignment. Alignments were computed with mmseqs2 (blast-like).

Usage

emale_prot_ava

Format

A data frame with 827 rows and 13 columns

file_id

name of the file the data was read from

feat_id

identifier of the first feature in the alignment

feat_id2

identifier of the second feature in the alignment

pident, length, mismatch, gapopen, start, end, start2, end2, evalue, bitscore

see https://github.com/seqan/lambda/wiki/BLAST-Output-Formats for BLAST-tabular format columns

Source

• Derived & bundled data: ex("emales/emales-prot-ava.o6")