geoBayes-package |
The 'geoBayes' package |
.geoBayes_corrfcn |
Spatial correlation used in the geoBayes package |
.geoBayes_models |
Models used in the geoBayes package |
alik_cutoff |
Approximate log-likelihood calculation |
alik_inla |
Log-likelihood approximation |
alik_optim |
Log-likelihood maximisation |
alik_plot |
Approximate log-likelihood calculation |
bf1skel |
Computation of Bayes factors at the skeleton points |
bf2new |
Compute the Bayes factors at new points |
bf2optim |
Empirical Bayes estimator |
bf2se |
Empirical Bayes standard errors |
bmbfse |
Batch means, Bayes factors standard errors |
geoBayes |
The 'geoBayes' package |
geoBayes_correlation |
Spatial correlation used in the geoBayes package |
geoBayes_models |
Models used in the geoBayes package |
linkfcn |
Calculate the link function for exponential families |
linkinv |
Calculate the link function for exponential families |
mcmcmake |
Convert to an 'mcmc' object |
mcsglmm |
MCMC samples from the Spatial GLMM |
mcsglmm_mala |
MCMC samples from the Spatial GLMM |
mcstrga |
MCMC samples from the transformed Gaussian model |
mcstrga_mala |
MCMC samples from the transformed Gaussian model |
mkpredgrid2d |
Make prediction grid |
plotbf2 |
Plot the estimated Bayes factors |
revlogreg |
Reverse logistic regression estimation |
rhizoctonia |
Rhizoctonia root rot infections |
rsglmm |
Simulation from a spatial model |
rsgrf |
Simulation from a spatial model |
rstrga |
Simulation from a spatial model |
select_proposals |
Selection of multiple importance sampling distributions |
select_proposals_ENT |
Selection of multiple importance sampling distributions |
select_proposals_MNX |
Selection of multiple importance sampling distributions |
select_proposals_SEQ |
Selection of multiple importance sampling distributions |
spcovariance |
Spatial variance-covariance matrix |
spcovariance.dist |
Spatial variance-covariance matrix |
spcovariance.formula |
Spatial variance-covariance matrix |
spcovariance.numeric |
Spatial variance-covariance matrix |
sploglik |
Spatial log likelihood |
sploglik_cross |
Spatial log likelihood |
stackdata |
Combine 'data.frame's |
subset.geomcmc |
Subset MCMC chain |