getArch_ids {geneHummus}

Get the potential architecture identifiers for the conserved domains

Description

Parses the SPARCLE database (NCBI) and extract the electronic identifiers for each conserved domain.

Usage

getArch_ids(gene_family)

Arguments

gene_family

A string with the conserved domain(s) defining the gene family. The domains have to be shown in the same order appearing in the sequences.

Value

the architectures identifiers for each of the conserved domains.

Author(s)

Jose V. Die

Examples

arf <- c("pfam06507")
getArch_ids(arf)