import_gff {geneHapR}

Import Annotations from GFF Format File

Description

import genome annotations in GFF/GFF3 format

Usage

import_gff(gffFile, format = "gff")

Arguments

gffFile

the gff file path

format

should be one of "gff", "gff1", "gff2", "gff3", "gvf", or "gtf". Default as gff

Value

GRange object

Examples

gff.Path <- system.file("extdata", "annotation.gff", package = "geneHapR")
gff <- import_gff(gff.Path, format = "gff")
gff