import_MultipleAlignment {geneHapR} | R Documentation |
Import MultipleAlignment Result
Description
import sequences algned results
Usage
import_MultipleAlignment(filepath, format = "fasta", type = "DNA")
Arguments
filepath |
A character vector (of arbitrary length when reading, of length 1
when writing) containing the paths to the files to read or write.
Note that special values like |
format |
Either |
type |
one of "DNA" and "Protein" |
Value
object of DNAMultipleAlignment
Examples
aliSeqPath <- system.file("extdata", "seqs.fa", package = "geneHapR")
geneSeqs <- import_MultipleAlignment(filepath = aliSeqPath,
format = "fasta",
type = "DNA")
geneSeqs <- import_MultipleAlignment(filepath = aliSeqPath,
format = "fasta",
type = "Protein")
[Package geneHapR version 1.2.4 Index]