getGenePOS {geneHapR} | R Documentation |
Get Gene Position
Description
Get Gene Position
Usage
getGenePOS(gff= gff,
geneID = geneID,
type = type,
gffTermContaingeneID = "Parent")
Arguments
gff |
imported gff |
geneID |
target geneID |
type |
vector consist with one or more types in gff |
gffTermContaingeneID |
which term contains the geneID in your gff, defalt is Parent |
Value
named vectors contains start, end and strand
Examples
data("geneHapR_test")
genePOS <- getGenePOS(gff = gff,
geneID = "test1G0387",
type = "CDS",
gffTermContaingeneID = "Parent")
[Package geneHapR version 1.2.4 Index]