| whscore {gap} | R Documentation |
Whittemore-Halpern scores for allele-sharing
Description
Whittemore-Halpern scores for allele-sharing
Usage
whscore(allele, type)
Arguments
allele |
a matrix of alleles of affected pedigree members. |
type |
0 = pairs, 1 = all. |
Details
Allele sharing score statistics.
Value
The returned value is the value of score statistic.
Note
adapted from GENEHUNTER.
Author(s)
Leonid Kruglyak, Jing Hua Zhao
References
Kruglyak L, Daly MJ, Reeve-Daly MP, Lander ES (1996). “Parametric and nonparametric linkage analysis: a unified multipoint approach.” Am J Hum Genet, 58(6), 1347-63. ISSN 0002-9297 (Print) 0002-9297.
Whittemore AS, Halpern J (1994). “A class of tests for linkage using affected pedigree members.” Biometrics, 50(1), 118-27. ISSN 0006-341X (Print) 0006-341x.
Whittemore AS, Halpern J (1994). “Probability of gene identity by descent: computation and applications.” Biometrics, 50(1), 109-17. ISSN 0006-341X (Print) 0006-341x.
Examples
## Not run:
c<-matrix(c(1,1,1,2,2,2),ncol=2)
whscore(c,type=1)
whscore(c,type=2)
## End(Not run)