Generalized Additive Latent and Mixed Models


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Documentation for package ‘galamm’ version 0.2.0

Help Pages

anova.galamm Compare likelihoods of galamm objects
coef.galamm Extract galamm coefficients
cognition Simulated Data with Measurements of Cognitive Abilities
confint.galamm Confidence intervals for model parameters
deviance.galamm Extract deviance of galamm object
diet Diet Data
epilep Epilepsy Data
extract_optim_parameters Extract parameters from fitted model for use as initial values
extract_optim_parameters.galamm Extract parameters from fitted model for use as initial values
factor_loadings Extract factor loadings from galamm object
factor_loadings.galamm Extract factor loadings from galamm object
family.galamm Extract family or families from fitted galamm
fitted.galamm Extract model fitted values
fixef Extract fixed effects from galamm objects
fixef.galamm Extract fixed effects from galamm objects
formula.galamm Extract formula from fitted galamm object
galamm Fit a generalized additive latent and mixed model
galamm_control Control values for galamm fit
hsced Example Data with Heteroscedastic Residuals
latent_covariates Simulated Data with Latent and Observed Covariates Interaction
latent_covariates_long Simulated Longitudinal Data with Latent and Observed Covariates Interaction
lifespan Simulated Dataset with Lifespan Trajectories of Three Cognitive Domains
logLik.galamm Extract Log-Likelihood of galamm Object
mresp Simulated Mixed Response Data
mresp_hsced Simulated Mixed Response Data with Heteroscedastic Residuals
nobs.galamm Extract the Number of Observations from a galamm Fit
plot.galamm Diagnostic plots for galamm objects
plot_smooth Plot smooth terms for galamm fits
plot_smooth.galamm Plot smooth terms for galamm fits
predict.galamm Predictions from a model at new data values
print.summary.galamm Print method for summary GALAMM fits
print.VarCorr.galamm Print method for variance-covariance objects
ranef Extract random effects from galamm object.
ranef.galamm Extract random effects from galamm object.
residuals.galamm Residuals of galamm objects
s Set up smooth term with factor loading
sigma.galamm Extract square root of dispersion parameter from galamm object
sl Set up smooth term with factor loading
summary.galamm Summarizing GALAMM fits
t2 Set up smooth term with factor loading
t2l Set up smooth term with factor loading
VarCorr Extract variance and correlation components from model
VarCorr.galamm Extract variance and correlation components from model
vcov.galamm Calculate variance-covariance matrix for GALAMM fit