summary.funspace {funspace}R Documentation

Summarizing Functional Spaces

Description

summary method for class funspace"

Usage

## S3 method for class 'funspace'
summary(object, ...)

Arguments

object

A funspace object produced by funspace(), funspaceGAM(), or funspaceNull().

...

Other arguments

Details

Produces default summary. If the input object was generated with funspace(), the summary includes information about the characteristics of the functional space (particularly if it derives from a PCA), along with functional diversity indicators (functional richness and functional divergence) for the whole set of observations and for each group (in case groups are specified). If the input object was generated with funspaceGAM(), the function returns the summary for the GAM models for the whole set of observations and individual groups. In the case of funspace objects based on a TPD object created with the TPD package, only information about groups is provided (since there is no global distribution). If the input was generated with funspaceNull(), the function returns tests exploring the difference between the observed functional richness and the null model functional richness.

Value

No return value. This function is called for its side effect: summarizing objects of class "funspace".

Examples

x <- princomp(GSPFF)
funtest <- funspace(x = x, PCs = c(1, 2), threshold = 0.95)
summary(funtest)


[Package funspace version 0.2.1 Index]