Functional Rarity Indices Computation
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Documentation for package ‘funrar’ version 1.5.0
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| combination_trait_dist | Compute Multiple distance matrices from a single trait table |
| compute_dist_matrix | Compute a Functional Dissimilarity Matrix |
| distance_matrix | Compute a Functional Dissimilarity Matrix |
| distinctiveness | Functional Distinctiveness on site-species matrix |
| distinctiveness_alt | Truncated Functional Distinctiveness |
| distinctiveness_com | Functional Distinctiveness for a single community |
| distinctiveness_dimensions | Distinctiveness across combinations of traits |
| distinctiveness_global | Global/Regional Functional Distinctiveness from dissimilarity matrix |
| distinctiveness_range | Alternative Truncated Functional Distinctiveness |
| distinctiveness_stack | Functional Distinctiveness on a stacked data.frame |
| distinctiveness_tidy | Functional Distinctiveness on a stacked data.frame |
| funrar | Compute all Functional Rarity Indices from Matrices |
| funrar_stack | Compute all Functional Rarity Indices from stacked data.frames |
| is_relative | Tell if matrix or data.frame has relative abundances |
| make_relative | Relative abundance matrix from absolute abundance matrix |
| matrix_to_stack | Matrix to stacked (= tidy) data.frame |
| matrix_to_tidy | Matrix to stacked (= tidy) data.frame |
| restrictedness | Geographical Restrictedness on site-species matrix |
| restrictedness_stack | Geographical Restrictedness for stacked data.frame |
| restrictedness_tidy | Geographical Restrictedness for stacked data.frame |
| scarcity | Scarcity on site-species matrix |
| scarcity_com | Scarcity for a single community |
| scarcity_stack | Scarcity on a stacked data.frame |
| scarcity_tidy | Scarcity on a stacked data.frame |
| stack_to_matrix | Stacked (= tidy) data.frame to matrix |
| tidy_to_matrix | Stacked (= tidy) data.frame to matrix |
| uniqueness | Functional Uniqueness for site-species matrix matrix |
| uniqueness_dimensions | Uniqueness across combinations of traits |
| uniqueness_stack | Functional Uniqueness on stacked data.frame |
| uniqueness_tidy | Functional Uniqueness on stacked data.frame |