my.read.genepop {fsthet}

This reads a genepop file into R

Description

This reads a genepop file into R. It was adapted from a similar functionin adegenet.

Usage

my.read.genepop(file, ncode = 2L, quiet = FALSE)

Arguments

file

is the filename of the genpop file.

quiet

If quiet = FALSE updates will be printed. If quiet = T status updates will not be printed.

ncode

Do not change this argument.

Value

res

A dataframe with the Population ID in column 1, the Individual ID in column 2, and the genotypes in columns following that. There is one row per individual.

References

http://adegenet.r-forge.r-project.org/

Examples

  gfile<-system.file("extdata", "example.genepop.txt",package = 'fsthet')
  gpop<-my.read.genepop(gfile)