brainviews {fsbrain}

Show one or more views of the given meshes in rgl windows.

Description

Show one or more views of the given meshes in rgl windows.

Usage

brainviews(
  views,
  coloredmeshes,
  rgloptions = rglo(),
  rglactions = list(),
  style = "default",
  draw_colorbar = FALSE,
  background = "white"
)

Arguments

views

list of strings. Valid entries include: 'si': single interactive view. 'sd_<angle>': single view from angle <angle>. The <angle> part must be one of the strings returned by get.view.angle.names. Example: 'sd_caudal'. 'sr': single rotating view. 't4': tiled view showing the brain from 4 angles. 't9': tiled view showing the brain from 9 angles.

coloredmeshes

list of coloredmesh or renderable. A coloredmesh is a named list as returned by the coloredmesh.from.* functions. It has the entries 'mesh' of type tmesh3d, a 'col', which is a color specification for such a mesh.

rgloptions

option list passed to par3d. Example: rgloptions = list("windowRect"=c(50,50,1000,1000))

rglactions

named list. A list in which the names are from a set of pre-defined actions. The values can be used to specify parameters for the action.

style

character string, a rendering style, e.g., 'default', 'shiny' or 'semitransparent'.

draw_colorbar

logical, whether to draw a colorbar. WARNING: The colorbar is drawn to a subplot, and this only works if there is enough space for it. You will have to increase the plot size using the 'rlgoptions' parameter for the colorbar to show up. Defaults to FALSE. See coloredmesh.plot.colorbar.separate for an alternative.

background

the background color for the visualization, e.g., 'white' or '#FF0000'. Note that alpha/transparency is not supported by rgl.

Value

list of coloredmeshes. The coloredmeshes used for the visualization.

See Also

get.view.angle.names