flowTraceR {flowTraceR}

flowTraceR: a package for standardization of level information and tracking inter-software differences in bottom-up label-free proteomics

Description

Useful functions to standardize software outputs from ProteomeDiscoverer, Spectronaut, DIA-NN and MaxQuant on precursor, modified peptide and proteingroup level and to trace software differences for identifications such as varying proteingroup denotations for common precursor.

Author(s)

Maintainer: Oliver Kardell [e-mail]

See Also

Useful links:

• https://github.com/OKdll/flowTraceR