plot.rsp {factor.switching}

Plot posterior means and credible regions

Description

This function plot posterior mean estimates per factor along with Highest Density Intervals, as well as simultaneous credible regions.

Usage

## S3 method for class 'rsp'
plot(x, prob, myCol, mfrow, subSet, simCR, HDI, ...)

Arguments

x

An object of class rsp.

prob

Coverage probability of credible regions.

myCol

Vector of colours.

mfrow

Number of rows and columns in the resulting graphic.

subSet

Enable to plot a subset of factors.

simCR

Logical value for plotting simultaneous credible regions. Default: True.

HDI

Logical value for plotting Highest Density Intervals per factor loading. Default: True.

...

Ignored

Value

A plot.

Author(s)

Panagiotis Papastasmoulis

Examples

# load small mcmc sample of 100 iterations
#	with p=6 variables and q=2 factors.
data(small_posterior_2chains)
# post-process it
reorderedPosterior <- rsp_exact(
	lambda_mcmc = small_posterior_2chains[[1]])
# plot it
plot(reorderedPosterior, mfrow = c(1,2), prob=0.95)