Helper Functions for Bayesian Analyses


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Documentation for package ‘extras’ version 0.6.1

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A C D F I K L N O P Q R S U V X Z

-- A --

as_list As List
as_list.default As List
as_list_unnamed As List
as_list_unnamed.default As List

-- C --

chk_index Check Index
chk_indices Check Indices
chk_pars Check Parameter Names

-- D --

dbern Bernoulli Distribution
dev_bern Bernoulli Deviances
dev_beta_binom Beta-Binomial Deviances
dev_binom Binomial Deviances
dev_gamma Gamma Deviances
dev_gamma_pois Gamma-Poisson Deviances
dev_gamma_pois_zi Zero-Inflated Gamma-Poisson Deviances
dev_lnorm Log-Normal Deviances
dev_neg_binom Negative Binomial Deviances
dev_norm Normal Deviances
dev_pois Poisson Deviances
dev_pois_zi Zero-Inflated Poisson Deviances
dev_student Student's t Deviances

-- F --

fabs Absolute
fill_all Fill All Values
fill_all.character Fill All Values
fill_all.integer Fill All Values
fill_all.logical Fill All Values
fill_all.numeric Fill All Values
fill_na Fill Missing Values
fill_na.character Fill Missing Values
fill_na.integer Fill Missing Values
fill_na.logical Fill Missing Values
fill_na.numeric Fill Missing Values

-- I --

ilog Inverse Log Transformation
ilogit Inverse Logistic Transformation
invlogit Inverse Logistic Transformation
inv_logit Inverse Logistic Transformation
inv_odds Inverse Odds

-- K --

kurtosis Kurtosis

-- L --

log<- Log Transformation
logit Logistic Transformation
logit<- Logistic Transformation
log_lik_bern Bernoulli Log-Likelihood
log_lik_beta_binom Beta-Binomial Log-Likelihood
log_lik_binom Binomial Log-Likelihood
log_lik_gamma Gamma Log-Likelihood
log_lik_gamma_pois Gamma-Poisson Log-Likelihood
log_lik_gamma_pois_zi Zero-Inflated Gamma-Poisson Log-Likelihood
log_lik_lnorm Log-Normal Log-Likelihood
log_lik_neg_binom Negative Binomial Log-Likelihood
log_lik_norm Normal Log-Likelihood
log_lik_pois Poisson Log-Likelihood
log_lik_pois_zi Zero-Inflated Poisson Log-Likelihood
log_lik_student Student's t Log-Likelihood
log_odds Log Odds
log_odds<- Inverse Log Odds Transformation
log_odds_ratio Log-Odds Ratio
log_odds_ratio2 Log Odds Ratio2
lower Lower Credible Limit

-- N --

numericise Numericise (or Numericize)
numericise.array Numericise (or Numericize)
numericise.data.frame Numericise (or Numericize)
numericise.Date Numericise (or Numericize)
numericise.double Numericise (or Numericize)
numericise.factor Numericise (or Numericize)
numericise.hms Numericise (or Numericize)
numericise.integer Numericise (or Numericize)
numericise.logical Numericise (or Numericize)
numericise.matrix Numericise (or Numericize)
numericise.POSIXct Numericise (or Numericize)
numericize Numericise (or Numericize)

-- O --

odds Odds
odds<- Inverse Odds Transformation
odds_ratio Odds Ratio
odds_ratio2 Odds Ratio2

-- P --

par_pattern Parameter Pattern
pbern Bernoulli Distribution
pextreme Extreme Probability
phi Phi
pow Power
proportional_change Proportional Change
proportional_change2 Proportional Change2
proportional_difference Proportional Difference
proportional_difference2 Proportional Difference2
pvalue Bayesian P-Value
pzeros Proportion of Zeros

-- Q --

qbern Bernoulli Distribution

-- R --

ran_bern Bernoulli Random Samples
ran_beta_binom Beta-Binomial Random Samples
ran_binom Binomial Random Samples
ran_gamma Gamma Random Samples
ran_gamma_pois Gamma-Poisson Random Samples
ran_gamma_pois_zi Zero-Inflated Gamma-Poisson Random Samples
ran_lnorm Log-Normal Random Samples
ran_neg_binom Negative Binomial Random Samples
ran_norm Normal Random Samples
ran_pois Poisson Random Samples
ran_pois_zi Zero-Inflated Poisson Random Samples
ran_student Student's t Random Samples
rbern Bernoulli Distribution
res_bern Bernoulli Residuals
res_beta_binom Beta-Binomial Residuals
res_binom Binomial Residuals
res_gamma Gamma Residuals
res_gamma_pois Gamma-Poisson Residuals
res_gamma_pois_zi Zero-Inflated Gamma-Poisson Residuals
res_lnorm Log-Normal Residuals
res_neg_binom Negative Binomial Residuals
res_norm Normal Residuals
res_pois Poisson Residuals
res_pois_zi Zero-Inflated Poisson Residuals
res_student Student's t Residuals

-- S --

sextreme Extreme Surprisal
skewness Skewness
step Step
svalue Surprisal Value

-- U --

upper Upper Credible Limit

-- V --

variance Variance
vld_index Check Index
vld_indices Check Indices
vld_pars Check Parameter Names

-- X --

xtr_mean Mean
xtr_median Median
xtr_sd Standard Deviation

-- Z --

zeros Zeros
zscore Z-Score