plotProfile {erah}

Plotting chromatographic profile

Description

Plots the chromatophic profiles of the compounds found by eRah.

Usage

plotProfile(Experiment,AlignId, per.class = T, xlim = NULL, cols=NULL)

## S4 method for signature 'MetaboSet'
plotProfile(Experiment, AlignId, per.class = T, xlim = NULL, cols = NULL)

Arguments

Experiment

A 'MetaboSet' S4 object containing the experiment after being deconolved, aligned and (optionally) identified.

AlignId

the Id identificator for the compound to be shown.

per.class

logical. if TRUE (by default) the profiles are shown one color per class, if FALSE one color per sample.

xlim

x axsis (retention time) limits (see plot.default).

cols

vector of colors. Colors are used cyclically.

Author(s)

Xavier Domingo-Almenara. [e-mail]

See Also

plotSpectra plotAlign