gifmr {enviGCMS} | R Documentation |
plot scatter plot for rt-mz profile and output gif file for multiple groups
Description
plot scatter plot for rt-mz profile and output gif file for multiple groups
Usage
gifmr(
list,
ms = c(100, 500),
rsdcf = 30,
inscf = 5,
imputation = "i",
name = "test",
...
)
Arguments
list |
list with data as peaks list, mz, rt and group information |
ms |
the mass range to plot the data |
rsdcf |
the rsd cutoff of all peaks in all group |
inscf |
Log intensity cutoff for peaks across samples. If any peaks show a intensity higher than the cutoff in any samples, this peaks would not be filtered. default 5 |
imputation |
parameters for 'getimputation' function method |
name |
file name for gif file, default test |
... |
parameters for 'plot' function |
Value
gif file
Examples
## Not run:
data(list)
gifmr(list)
## End(Not run)
[Package enviGCMS version 0.7.1 Index]