getbiotechrep {enviGCMS}R Documentation

Get the report for biological replicates.

Description

Get the report for biological replicates.

Usage

getbiotechrep(
  xset,
  method = "medret",
  intensity = "into",
  file = NULL,
  rsdcf = 30,
  inscf = 1000
)

Arguments

xset

the xcmsset object which for all of your technique replicates for bio replicated sample in single group

method

parameter for groupval function

intensity

parameter for groupval function

file

file name for further annotation, default NULL

rsdcf

rsd cutoff for peaks, default 30

inscf

intensity cutoff for peaks, default 0

Value

dataframe with mean, standard deviation and RSD for those technique replicates & biological replicates combined with raw data


[Package enviGCMS version 0.6.6 Index]